rs12644866 chr4:122746449 T>A

Sequence
tgctgtgcaggtttgtagcctagg[T/A]tcagtgggctcatatagcctaggt
ASB in cell types
CD14+ monocytes
ASB for transcription factors
STAT1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAT1_HUMAN 2.03 -0.98 0.041.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP birth weight,  cystatin c in serum,  ldl cholesterol,  parkinsons disease,  total cholesterol
GTEx eQTL Adrenal_Gland,  Artery_Tibial,  Brain_Caudate_basal_ganglia,  Brain_Cerebellar_Hemisphere,  Brain_Cerebellum,  Brain_Cortex,  Brain_Frontal_Cortex_BA9,  Brain_Hypothalamus,  Brain_Spinal_cord_cervical_c-1,  Cells_Cultured_fibroblasts,  Heart_Left_Ventricle,  Muscle_Skeletal,  Testis

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