rs12647573 chr4:11529690 G>A
- Sequence
gctgttgctgttactaggcctcac[G/A]gtacccagttcctaagaaacttcc
- ASB in cell types
- KerCT (keratenocytes)
- ASB for transcription factors
- FOXA2_HUMAN JUND_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA2_HUMAN | -1.30 | 2.07 | 1.00 | n/a | No Hit | |||
| JUND_HUMAN | -2.77 | 1.76 | 1.33 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP ldl cholesterol change with statins, neuroblastoma (brain cancer), parkinsons disease (pd), salmonella-induced pyroptosis, total cholesterol change with statins, triglycerides