rs12648239 chr4:7320559 T>C

Sequence
atggctggtgtgacagctgatgtc[T/C]gccagacggctgcaggtgggggtt
ASB in cell types
TMD8 (diffuse large B-cell lymphoma) SU-DHL-2 (anaplastic large cell lymphoma)
ASB for transcription factors
ITF2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ITF2_HUMAN -1.94 2.56 1.007.6·10-4 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration advanced age-related macular degeneration (geographic atrophy) college completion hdl cholesterol total cholesterol years of education
GTEx eQTL Brain_Spinal_cord_cervical_c-1 Brain_Substantia_nigra

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