rs12650325 chr4:119103550 C>T
- Sequence
aaatgatgtaagaccatttcctct[C/T]cattaccagcagctaagagtaaca
- ASB in cell types
- MDM(monocyte derived macrophages) monocyte-derived macrophages from peripheral blood HUVEC-C (HUVEC, umbilical vein endothelial cells)
- ASB for transcription factors
- SPI1_HUMAN TF65_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 1.07 | 0.48 | 1.53 | 1.50 | Weak Discordant | |||
| TF65_HUMAN | 1.62 | 0.28 | 2.42 | n/a | No Hit |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Tibial, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Spleen, Whole_Blood