rs12650679 chr4:68906118 A>G

Sequence
tttgtctttgtagctggcagcaca[A/G]ttgatttctcttggcttgagctgt
ASB in cell types
breast tumor 22RV1 (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 1.81 -0.98 0.031.00 2.00 3.36 Discordant
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Motif analysis

ANDR_HUMAN Discordant
ANDR_HUMAN pic

Genetic associations

GRASP barnes akathisia rating scale,  homa-b,  ldl cholesterol,  mitral annular calcium,  parkinsons disease,  total cholesterol
GTEx eQTL Brain_Cerebellar_Hemisphere,  Brain_Cerebellum,  Heart_Atrial_Appendage,  Lung,  Pancreas,  Prostate

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