rs12654102 chr5:1962322 A>G
- Sequence
tctgctgtcggcagcgttttaggg[A/G]ctgaaatctgtcatcctgccaggc
- ASB in cell types
- MOLT-4 (Adult T acute lymphoblastic leukemia) Jurkat (T-cells)
- ASB for transcription factors
- CDK9_HUMAN KDM6A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CDK9_HUMAN | 1.73 | -0.91 | 1.00 | n/a | n/a | |||
| KDM6A_HUMAN | 2.27 | n/a | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Brain_Cortex, Esophagus_Mucosa, Heart_Atrial_Appendage, Heart_Left_Ventricle, Muscle_Skeletal, Nerve_Tibial, Ovary, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Vagina