rs12662924 chr6:166309461 G>C

Sequence
cagagaactgcgctgtggatacat[G/C]ggagcgtcaaggaaacctggcagg
ASB for transcription factors
FOXA2_HUMAN FOXA1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA2_HUMAN 2.60 1.02 0.031.00 1.75 n/a No Hit
FOXA1_HUMAN 1.23 -0.00 0.051.00 1.25 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Subcutaneous,  Cells_Cultured_fibroblasts,  Heart_Atrial_Appendage,  Lung,  Nerve_Tibial,  Spleen,  Thyroid,  Whole_Blood

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