rs12664443 chr6:167218584 T>C
- Sequence
cggctgagttcaccacaggcgcca[T/C]gtgttcttcatgctgtagaatcac
- ASB in cell types
- RH4 (alveolar rhabdomyosarcoma) LUHMES (lund human mesencephalic cells) IMR-5 (Neuroblastoma) foreskin keratinocyte
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN BHE40_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.29 | 0.95 | 1.28 | n/a | No Hit | |||
| RAD21_HUMAN | 2.47 | 0.14 | 1.30 | n/a | n/a | |||
| BHE40_HUMAN | 2.61 | -4.05 | 1.33 | 3.89 | Discordant |
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Motif analysis
