rs12664446 chr6:106488608 G>A

Sequence
cttgcaggccagaggctatacgca[G/A]ctctctctggtggggtgggctgac
ASB in cell types
CD34+ hematopoietic stem cells-derived proerythroblasts K562 (myelogenous leukemia)
ASB for transcription factors
GATA1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GATA1_HUMAN n/a 3.51 1.001.5·10-6 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP fasting blood glucose,  infant head circumference,  salmonella-induced pyroptosis,  transmission distortion,  triglycerides change with statins
GTEx eQTL Cells_Cultured_fibroblasts,  Pancreas,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg

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