rs12665079 chr6:159931386 G>C
- Sequence
ccctggagtactcaaatgcataga[G/C]acagaaagtagaatgctggttgcc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) CAR-T cells
- ASB for transcription factors
- COE1_HUMAN IRF4_HUMAN ARNT_HUMAN SKIL_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| COE1_HUMAN | 3.21 | n/a | 1.50 | n/a | No Hit | |||
| IRF4_HUMAN | 0.32 | 2.40 | 1.00 | 0.44 | Weak Concordant | |||
| ARNT_HUMAN | -1.85 | 2.16 | 1.00 | n/a | No Hit | |||
| SKIL_HUMAN | -1.66 | 1.92 | 1.00 | n/a | n/a |
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Motif analysis
