rs12668059 chr7:86469867 G>A

Sequence
gtcccgaccacagaatatggtaca[G/A]ttctgccacctagtggttgccttc
ASB in cell types
tibial artery GM10847 (female B-cells Lymphoblastoid Cell Lines) SK-N-SH (neuroblastoma) HMEC (human mammary epithelial cells)
ASB for transcription factors
STAG1_HUMAN ZN444_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAG1_HUMAN -0.17 0.83 1.003.7·10-3 1.00 n/a n/a
ZN444_HUMAN 2.51 -2.35 0.031.00 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Breast_Mammary_Tissue Esophagus_Mucosa Skin_Sun_Exposed_Lower_leg

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