rs12668403 chr7:81956605 T>C
- Sequence
tttggcgtcttttgccatgaaaac[T/C]attcttttattatgccagaagact
- ASB in cell types
- GM19193 (female B-cells Lymphoblastoid Cell Lines) GM02255 (Lymphoblastoid Cell Lines) GM19239 (male B-cells lymphoblastoid cell line) GM18526 (B – cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- IKZF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF2_HUMAN | 2.06 | 0.11 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP autism with high iq, homa-b, late onset alzheimers disease, serum creatinine, tetrology of fallot