rs12669478 chr7:25744045 G>T

Sequence
tgcctcacttgggaaacgcaaggg[G/T]tcagcgagttccatttccgagtca
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
CEBPB_HUMAN NFRKB_HUMAN MGAP_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CEBPB_HUMAN 3.55 n/a 8.9·10-51.00 2.00 n/a No Hit
NFRKB_HUMAN 3.25 n/a 0.021.00 2.00 n/a n/a
MGAP_HUMAN 1.95 n/a 0.041.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP diabetic retinopathy in type 2 diabetes mellitus diastolic blood pressure (dbp) homa-b refractive error
GTEx eQTL Brain_Caudate_basal_ganglia Brain_Hypothalamus Brain_Putamen_basal_ganglia Esophagus_Muscularis

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