rs12669791 chr7:53231057 T>C
- Sequence
gtttttatagcttatttgttcaaa[T/C]caagaatctatcagattacagagt
- ASB in cell types
- LNCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 0.07 | 1.53 | 1.56 | 0.23 | Weak Concordant |
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Motif analysis
Genetic associations
GRASP 2 hour glucose, adiponectin levels, fasting insulin, homa-b, homa-ir, microalbuminuria, urinary albumin-to-creatinine ratio