rs12670074 chr7:141738604 T>C

Sequence
tggcgccatcttcggtaaagggtg[T/C]ccacctctccctatggtgtggctg
ASB in cell types
GM18505 (female B-cells Lymphoblastoid Cell Lines) gastroesophageal sphincter
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 1.12 0.06 4.9·10-51.00 1.20 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP diabetic retinopathy in type 2 diabetes mellitus
GTEx eQTL Adipose_Subcutaneous,  Artery_Tibial,  Brain_Cerebellum,  Cells_Cultured_fibroblasts,  Esophagus_Gastroesophageal_Junction,  Esophagus_Mucosa,  Nerve_Tibial,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Thyroid,  Whole_Blood

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