rs12670520 chr7:80722968 T>C
- Sequence
atgagccactgcactttgtgccag[T/C]gtactctgtgcctcttcccactgg
- ASB in cell types
- CD14+ monocytes MDM(monocyte derived macrophages)
- ASB for transcription factors
- STAT1_HUMAN TF65_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | -1.09 | 2.80 | 2.00 | n/a | No Hit | |||
| TF65_HUMAN | n/a | 2.91 | 2.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Heart_Atrial_Appendage, Heart_Left_Ventricle, Muscle_Skeletal, Nerve_Tibial, Skin_Sun_Exposed_Lower_leg, Stomach, Whole_Blood