rs12672159 chr7:33092133 A>G

Sequence
ccacaaacgtaaaagctcaaaacc[A/G]ccatcattgattacctcacggtgg
ASB for transcription factors
CTCF_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 2.06 n/a 0.041.00 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol change with statins,  triglycerides change with statins
GTEx eQTL Adipose_Subcutaneous,  Brain_Amygdala,  Brain_Frontal_Cortex_BA9,  Brain_Putamen_basal_ganglia,  Heart_Atrial_Appendage,  Muscle_Skeletal,  Nerve_Tibial,  Testis,  Thyroid

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