rs12672250 chr7:25720606 T>A

Sequence
aaatcccttatcagctgggtgtta[T/A]tattatccccattttaaagatggg
ASB in cell types
GM19193 (female B-cells Lymphoblastoid Cell Lines) HeLa Kyoto (cervical adenocarcinoma)

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
GM19193 (female B-cells Lymphoblastoid Cell Lines) 1.68 -0.93 0.021.00 1.00
HeLa Kyoto (cervical adenocarcinoma) 1.38 -0.17 0.050.88 2.00
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Motif analysis

No data available

Genetic associations

GRASP diabetic retinopathy in type 2 diabetes mellitus,  diastolic blood pressure (dbp),  homa-b,  refractive error,  serum creatinine
GTEx eQTL Brain_Caudate_basal_ganglia,  Brain_Hypothalamus,  Brain_Putamen_basal_ganglia,  Esophagus_Muscularis

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