rs12674330 chr7:5064644 G>A
- Sequence
cagtgaccatcagagaactcacac[G/A]ggagagaagctttataaatgtaat
- ASB in cell types
- CD34+ hematopoietic stem cells GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- TIF1B_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TIF1B_HUMAN | 3.29 | n/a | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP arthritis including non-rheumatoid, fasting insulin, infant head circumference, irritible bowel syndrome, lp-pla2 activity, lp-pla2 mass, sporadic creutzfeldt-jakob disease, variant creutzfeldt-jakob disease
GTEx eQTL Adipose_Visceral_Omentum, Cells_Cultured_fibroblasts, Muscle_Skeletal, Skin_Not_Sun_Exposed_Suprapubic, Testis, Thyroid, Whole_Blood