rs12675506 chr8:38527084 T>C

Sequence
gatgtagggcagtgtctgtgccta[T/C]tgaatggcctcaacagtgctgtgt
ASB in cell types
iPS-derived chondrocytes
ASB for transcription factors
RARA_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RARA_HUMAN -0.74 2.78 1.003.8·10-12 1.00 0.55 Weak Concordant
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Motif analysis

RARA_HUMAN Weak Concordant
RARA_HUMAN pic

Genetic associations

GTEx eQTL Brain_Cerebellar_Hemisphere Brain_Cerebellum Brain_Cortex Testis

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