rs12677862 chr8:143049133 C>G

Sequence
atgggggttcaaggggatgtccca[C/G]accctgtcatggtccagcttggct
ASB in cell types
GM12890 (Lymphoblastoid Cell Lines)
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN -1.85 2.17 1.007.8·10-4 1.61 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol ldl cholesterol
GTEx eQTL Adipose_Subcutaneous Brain_Cerebellar_Hemisphere Brain_Cerebellum Heart_Atrial_Appendage Nerve_Tibial Thyroid Whole_Blood

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