ADASTRA v6.1.1
Search
Browse
Annotate
Help
Downloads
About
rs12683797
chr9:91886822
G
>
A
Sequence
ggaaaagataacgttacctgctgg[G/A]gcatctttcttctcaccacaggtc
ASB in cell types
iPS-derived dermal fibroblasts
iPS-derived chondrocytes
ASB for transcription factors
RARA_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RARA_HUMAN
2.12
-0.99
8.6·10
-7
1.00
1.00
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
height
,
ldl cholesterol
,
partial epilepsy
GTEx eQTL
Adipose_Subcutaneous
,
Adrenal_Gland
,
Artery_Tibial
,
Brain_Cerebellum
,
Brain_Cortex
,
Brain_Frontal_Cortex_BA9
,
Brain_Nucleus_accumbens_basal_ganglia
,
Lung
,
Pancreas
,
Pituitary
,
Skin_Sun_Exposed_Lower_leg
,
Thyroid
Download
Download page in JSON
Generated by ADASTRA database
2025.04.22 v6.1.1 Mabel
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale
log2(Alt/Ref motif p-value)