rs12687833 chrX:139759848 C>T

Sequence
tttgccattttaacgcttgttttg[C/T]tctccttaacagagcattccttcc
ASB in cell types
GM12892 (female B-cells lymphoblastoid cell line) GM19238 (female B-cells lymphoblastoid cell lines)
ASB for transcription factors
STAG1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAG1_HUMAN 1.69 -0.14 3.9·10-71.00 2.10 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP comorbid depressive syndrome and alcohol dependence
GTEx eQTL Adipose_Subcutaneous Brain_Cerebellar_Hemisphere Brain_Cerebellum

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