rs12691874 chr2:136122904 G>A

Sequence
gacagctatataaaaagaggaagc[G/A]cctagagccctgtggactgtcaag
ASB in cell types
THP-1 (acute monocytic leukemia) MDM(monocyte derived macrophages) macrophages form periferal blood RS4-11 (adult B acute lymphoblastic leukemia)
ASB for transcription factors
SPI1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SPI1_HUMAN 2.67 -1.51 2.8·10-571.00 1.44 -0.20 Weak Concordant
Items per page:
1 – 1 of 1

Motif analysis

SPI1_HUMAN Weak Concordant
SPI1_HUMAN pic

Genetic associations

GRASP change in depression severity with serotonin reuptake inhibitors (sri) hdl cholesterol change with statins ldl cholesterol total cholesterol
GTEx eQTL Esophagus_Muscularis Lung Thyroid

Download