rs12693257 chr2:180799336 C>T
- Sequence
actgccatcatgcgtgtttctttg[C/T]tctgtttattttgctgttctctgt
- ASB in cell types
- VCaP (prostate carcinoma) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 1.33 | 0.02 | 1.63 | -0.15 | Weak Concordant | |||
| ANDR_HUMAN | 0.81 | 0.40 | 1.62 | 2.69 | Discordant |
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Motif analysis
