rs12693801 chr2:196927842 C>T
- Sequence
tcaacagtagacggtgtgtgtgtg[C/T]gtgtgtgtgtagtaaccacaggat
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- IKZF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF2_HUMAN | 0.58 | 1.82 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP diastolic blood pressure (dbp), eye color, homa-b, obesity with early age of onset (age >2), tetrology of fallot