rs12699316 chr7:12172473 T>C
- Sequence
aaatccctagccttttgttttgaa[T/C]aatatttatgtattcataaacact
- ASB in cell types
- PANC1 (pancreatic ductal adenocarcinoma)
- ASB for transcription factors
- FOXA2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA2_HUMAN | 0.00 | 1.38 | 1.50 | 1.66 | Weak Concordant |
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Motif analysis
Genetic associations
GTEx eQTL Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Muscle_Skeletal, Ovary, Skin_Sun_Exposed_Lower_leg, Thyroid