rs12699853 chr7:17433053 G>T
- Sequence
tggaggagcaatatttactcaaat[G/T]ttatagatattttctactctcttc
- ASB in cell types
- LNCaP (prostate carcinoma) LN95(Prostate adenocarcinoma) VCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN HXB13_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 0.37 | 1.45 | 1.49 | n/a | No Hit | |||
| HXB13_HUMAN | -0.55 | 2.50 | 1.38 | 4.51 | Concordant |
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Motif analysis
