rs12700531 chr7:3041165 G>C
- Sequence
cccctggactcctagaacctgggc[G/C]ccctcttgtgaccctgccaacccc
- ASB in cell types
- 2588 (Lymphoblastoid Cell Lines) MS-1 (Small cell lung carcinoma)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 4.19 | -4.53 | 1.00 | -4.17 | Concordant | |||
| STAG1_HUMAN | 3.38 | n/a | 1.00 | n/a | n/a |
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Motif analysis
