rs12700652 chr7:3161547 T>C
- Sequence
gctgggattacaggtgtgtgccac[T/C]gcacctggccactggaccactctc
- ASB in cell types
- TMD8 (diffuse large B-cell lymphoma)
- ASB for transcription factors
- ITF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ITF2_HUMAN | 1.91 | -0.19 | 2.50 | 2.29 | Discordant |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Heart_Atrial_Appendage, Heart_Left_Ventricle, Skin_Sun_Exposed_Lower_leg, Vagina