rs12705424 chr7:107879278 A>G

Sequence
ttactgcttgcatagatgcctgat[A/G]tcctcaactaaatcatgagcttta
ASB for transcription factors
STAG1_HUMAN
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAG1_HUMAN -0.40 1.12 1.000.01 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol,  total cholesterol,  triglycerides,  type 2 diabetes
GTEx eQTL Brain_Amygdala,  Brain_Anterior_cingulate_cortex_BA24,  Brain_Caudate_basal_ganglia,  Brain_Cerebellar_Hemisphere,  Brain_Cerebellum,  Brain_Cortex,  Brain_Frontal_Cortex_BA9,  Brain_Hypothalamus,  Brain_Putamen_basal_ganglia,  Cells_Cultured_fibroblasts,  Lung,  Muscle_Skeletal,  Testis,  Thyroid

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