rs12706 chr13:21372640 G>A
- Sequence
ttttgaaaaaaaaagttttaaaat[G/A]ttctgtgtacatgtcaatgtaggt
- ASB in cell types
- 22RV1 (prostate carcinoma) primary prostate cancer
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| 22RV1 (prostate carcinoma) | 3.83 | -2.92 | 2.00 | |||
| primary prostate cancer | 1.99 | -0.31 | 2.00 |
Items per page:
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP 2 hour glucose, chronic kidney disease, infant head circumference, ldl cholesterol change with statins
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Aorta, Artery_Tibial, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Nerve_Tibial, Pancreas, Spleen, Thyroid, Uterus, Whole_Blood