rs12708213 chr8:41828296 A>C
- Sequence
gtgctgggctgtggcctccacacc[A/C]agcagccgccctgggccgccttcc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) foreskin keratinocyte A549 (lung carcinoma) CTV-1 (Adult T acute lymphoblastic leukemia)
- ASB for transcription factors
- RBBP5_HUMAN NFXL1_HUMAN ETS1_HUMAN AHR_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RBBP5_HUMAN | n/a | 3.04 | 2.50 | n/a | n/a | |||
| NFXL1_HUMAN | 2.47 | n/a | 1.00 | n/a | n/a | |||
| ETS1_HUMAN | n/a | 1.71 | 1.00 | n/a | No Hit | |||
| AHR_HUMAN | n/a | 2.30 | 1.00 | n/a | No Hit | |||
| NFAC3_HUMAN | 2.42 | -1.96 | 1.00 | n/a | No Hit |
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