rs12712206 chr2:105395699 A>G
- Sequence
gcagacaggtctatttccttgttg[A/G]ctgacaagctccatatttacatac
- ASB in cell types
- ZR-75-1 (invasive ductal carcinoma) MCF7 TamR (invasive ductal breast carcinoma Tamoxifen resistant)
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 2.13 | 0.06 | 1.58 | -1.45 | Weak Concordant |
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Motif analysis
