rs12718 chr8:76999994 G>T
- Sequence
tctctagggcagacactgacctta[G/T]gagtctgcgaaacgcccacgctcc
- ASB in cell types
- LNCaP C4-2 (prostate carcinoma) HepG2 (hepatoblastoma)
- ASB for transcription factors
- TYY1_HUMAN BRD4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TYY1_HUMAN | -0.63 | 1.76 | 1.58 | n/a | No Hit | |||
| BRD4_HUMAN | -0.09 | 1.24 | 1.58 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Spinal_cord_cervical_c-1, Cells_Cultured_fibroblasts