rs12746918 chr1:2416027 C>T
- Sequence
cagccccacggttcgtatccccat[C/T]cccccaccaacacccagtgcggtg
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- ZBT40_HUMAN IKZF1_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZBT40_HUMAN | n/a | 3.69 | 1.00 | n/a | No Hit | |||
| IKZF1_HUMAN | -3.01 | 2.89 | 1.00 | n/a | n/a | |||
| STAG1_HUMAN | -1.23 | 1.58 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Coronary, Colon_Transverse, Esophagus_Mucosa, Heart_Atrial_Appendage, Lung, Nerve_Tibial, Skin_Sun_Exposed_Lower_leg, Small_Intestine_Terminal_Ileum, Spleen, Stomach, Thyroid, Whole_Blood