rs12752678 chr1:9075347 C>G
- Sequence
gcaggttagctcctgcagccgtgg[C/G]gtaatccaacatcccaagagccat
- ASB in cell types
- 22RV1 (prostate carcinoma)
- ASB for transcription factors
- IKZF2_HUMAN ZBT17_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF2_HUMAN | 1.85 | -0.09 | 1.00 | n/a | n/a | |||
| ZBT17_HUMAN | 2.28 | -1.76 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Tibial, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Skin_Sun_Exposed_Lower_leg, Thyroid, Whole_Blood