ADASTRA v6.1.0
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rs12754681
chr1:11908303
C
>
T
Sequence
agtgttttaaaaacagatgcgatt[C/T]cgttaaatcgcgtgtggagctatg
ASB in cell types
foreskin keratinocyte
TTC-1240 (Rhabdoid tumor of the kidney)
HUVEC-C (HUVEC, umbilical vein endothelial cells)
cord blood-derived mononuclear cells
ASB for transcription factors
KMT2A_HUMAN
SUH_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
KMT2A_HUMAN
3.06
n/a
5.4·10
-3
1.00
2.00
n/a
No Hit
SUH_HUMAN
2.54
-1.75
0.04
1.00
2.00
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
diastolic blood pressure (dbp)
,
refractive error
,
systolic blood pressure (sbp)
GTEx eQTL
Adipose_Visceral_Omentum
,
Artery_Tibial
,
Brain_Cortex
,
Brain_Hypothalamus
,
Cells_Cultured_fibroblasts
,
Lung
,
Testis
,
Whole_Blood
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)