rs12925635 chr16:71467967 G>T
- Sequence
tgctagctccgactcagtgggggg[G/T]ggggggggggtgtgtctgtggcgc
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- SP130_HUMAN RARA_HUMAN ERF_HUMAN ZSC9_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SP130_HUMAN | -5.13 | 3.05 | 2.00 | n/a | n/a | |||
| RARA_HUMAN | -1.74 | 2.67 | 2.00 | 2.33 | Concordant | |||
| ERF_HUMAN | -2.21 | 3.00 | 2.00 | n/a | No Hit | |||
| ZSC9_HUMAN | n/a | 3.17 | 2.00 | n/a | n/a |
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Motif analysis
