rs12946 chr19:50858059 C>T

Sequence
cgtgatcttgctgggtcggcacag[C/T]ctgtttcatcctgaagacacaggc
ASB in cell types
22RV1 (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 2.88 -5.39 9.5·10-31.00 2.00 1.75 Weak Discordant
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Motif analysis

ANDR_HUMAN Weak Discordant
ANDR_HUMAN pic

Genetic associations

GTEx eQTL Colon_Transverse Skin_Not_Sun_Exposed_Suprapubic Thyroid

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