rs1295787 chr1:14598609 T>G
- Sequence
gggaggccaagggtgcccccagcc[T/G]ccgaccgagaccccctcccgagcc
- ASB in cell types
- K562 (myelogenous leukemia) GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- FOXK2_HUMAN ATF7_HUMAN BHE40_HUMAN BCLF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | 2.27 | -0.85 | 1.00 | n/a | No Hit | |||
| ATF7_HUMAN | 1.79 | 0.25 | 1.00 | n/a | No Hit | |||
| BHE40_HUMAN | 1.55 | -2.56 | 1.50 | n/a | No Hit | |||
| BCLF1_HUMAN | 2.47 | -0.77 | 1.00 | n/a | n/a |
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