rs12999065 chr2:181573337 C>G
- Sequence
cagtgcttagttttgacctaacca[C/G]caggggtcagagtcagaacgaaaa
- ASB in cell types
- GM12892 (female B-cells lymphoblastoid cell line) hepatocytes pancreas THP-1 (acute monocytic leukemia)
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.04 | 0.51 | 1.16 | -0.98 | Weak Concordant | |||
| RAD21_HUMAN | 1.15 | 0.25 | 1.08 | n/a | n/a |
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Motif analysis
