rs130473 chr22:47540119 G>T

Sequence
ggctaggaaggccagctgttcgat[G/T]aaacccattctctcctgtctcccc
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
ZN143_HUMAN HCFC1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZN143_HUMAN -2.69 1.79 1.007.5·10-4 1.50 n/a No Hit
HCFC1_HUMAN -2.24 2.60 1.009.3·10-3 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP irritible bowel syndrome
GTEx eQTL Nerve_Tibial Thyroid

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