ADASTRA v6.1.0
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rs130473
chr22:47540119
G
>
T
Sequence
ggctaggaaggccagctgttcgat[G/T]aaacccattctctcctgtctcccc
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
ZN143_HUMAN
HCFC1_HUMAN
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View in UCSC Genome Browser
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0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZN143_HUMAN
-2.69
1.79
1.00
7.5·10
-4
1.50
n/a
No Hit
HCFC1_HUMAN
-2.24
2.60
1.00
9.3·10
-3
1.00
n/a
n/a
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
irritible bowel syndrome
GTEx eQTL
Nerve_Tibial
,
Thyroid
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)