rs13062 chr2:218395928 C>A

Sequence
caacccattttccagacagtaaaa[C/A]ggcggcgcacttctttctccgtca
ASB in cell types
glioblastoma cells MV-4-11 (Childhood acute monocytic leukemia) adult erythroblasts
ASB for transcription factors
BRD4_HUMAN CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
BRD4_HUMAN 0.33 1.30 1.008.5·10-3 1.64 n/a n/a
CTCF_HUMAN 0.51 0.96 1.000.02 1.28 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP body mass index (bmi),  height
GTEx eQTL Artery_Tibial,  Brain_Caudate_basal_ganglia,  Brain_Cortex,  Cells_Cultured_fibroblasts,  Heart_Left_Ventricle,  Muscle_Skeletal,  Nerve_Tibial,  Skin_Sun_Exposed_Lower_leg,  Testis,  Thyroid,  Whole_Blood

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