rs13119394 chr4:41214658 A>C
- Sequence
gaaggctggagggacccggcgggg[A/C]gggggccgaatgggagaaaggcgg
- ASB in cell types
- GM19193 (female B-cells Lymphoblastoid Cell Lines) GM02610 (Lymphoblastoid Cell Lines) GM18486 (Lymphoblastoid Cell Lines) GM19238 (female B-cells lymphoblastoid cell lines)
- ASB for transcription factors
- STAG1_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | -0.69 | 1.12 | 1.06 | n/a | n/a | |||
| CTCF_HUMAN | 0.71 | 0.60 | 1.28 | -2.89 | Discordant |
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Motif analysis
