rs13119932 chr4:183722157 T>C
- Sequence
ctctgagaggacaaggcgggtggg[T/C]cacctgaggtcaggagttccagac
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) 2588 (Lymphoblastoid Cell Lines) GM12891 (male B- cells lymphoblastoid cell line)
- ASB for transcription factors
- IKZF1_HUMAN COT1_HUMAN IKZF2_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | -1.43 | 2.44 | 1.00 | n/a | n/a | |||
| COT1_HUMAN | -2.69 | 2.77 | 1.00 | 0.00 | Weak Discordant | |||
| IKZF2_HUMAN | -1.66 | 1.90 | 1.00 | n/a | n/a |
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Motif analysis
