rs13121538 chr4:76705734 C>T

Sequence
ggtcagctttgattcctagctctt[C/T]actcatagtggtaatattgagata
ASB in cell types
22RV1 (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 2.62 -1.27 1.3·10-31.00 2.00 3.61 Discordant
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Motif analysis

ANDR_HUMAN Discordant
ANDR_HUMAN pic

Genetic associations

GRASP 2 hour glucose,  amyotrophic lateral sclerosis (als),  diastolic blood pressure (dbp),  longstanding arthritis,  primary rhegmatogenous retinal detachment,  schizophrenia,  spine bone mineral density (bmd)
GTEx eQTL Esophagus_Mucosa,  Lung,  Muscle_Skeletal,  Nerve_Tibial,  Skin_Sun_Exposed_Lower_leg

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