rs13124365 chr4:152708639 C>T

Sequence
tctggcttgtaaacaaactgttga[C/T]cagatctagagatttcaggaaact
ASB in cell types
LNCaP (prostate carcinoma) breast tumor
ASB for transcription factors
ESR1_HUMAN FOXA1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ESR1_HUMAN -0.31 2.47 1.003.9·10-3 2.00 n/a No Hit
FOXA1_HUMAN 0.27 1.15 1.004.8·10-3 1.68 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP amyotrophic lateral sclerosis (als),  bipolar disorder,  comorbid depressive syndrome and alcohol dependence,  triglycerides,  waist hip ratio
GTEx eQTL Esophagus_Mucosa,  Pancreas,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg

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