rs13126475 chr4:54498991 G>A
- Sequence
atgtagggtcctggtctgacagga[G/A]cctgagtggtagcattccagaatg
- ASB in cell types
- Detroit 562 (Pharyngeal squamous cell carcinoma) iPS-derived chondrocytes iPS-derived dermal fibroblasts
- ASB for transcription factors
- TF65_HUMAN RARA_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TF65_HUMAN | -0.10 | 2.21 | 1.00 | n/a | No Hit | |||
| RARA_HUMAN | 0.84 | 1.61 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP mean corpuscular hemoglobin concentration (mchc), mean corpuscular volume (mcv), mitral annular calcium, parkinsons disease, red blood cell count (rbc)