rs13127378 chr4:164997485 G>C

Sequence
tcagtatggacatccaggaatgct[G/C]ccagcactacagaatagggtgcca
ASB in cell types
2588 (Lymphoblastoid Cell Lines) GM12890 (Lymphoblastoid Cell Lines)
ASB for transcription factors
TAL1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TAL1_HUMAN 2.24 -1.70 9.7·10-31.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP cystatin c in serum,  infant head circumference,  refractive error,  total cholesterol
GTEx eQTL Adipose_Subcutaneous,  Artery_Aorta,  Cells_Cultured_fibroblasts,  Cells_EBV-transformed_lymphocytes,  Colon_Transverse,  Esophagus_Muscularis,  Liver,  Lung,  Muscle_Skeletal,  Nerve_Tibial,  Testis,  Thyroid

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